sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCS-01598-01504
X
>3CME-01598-01504
X
>3CC2-01598-01504
X
>1S72-01598-01504
X
>1VQ5-01598-01504
X
>1Q81-A1598-A1504
X
>3CMA-01598-01504
X
>1K9M-A1598-A1504
X
>1FFK-01551-01457
X
</seq>
<hsp>
0 1:0.431052937505
0 2:0.938837832784
0 3:0.999990366772
0 4:0.996952140659
0 5:0.813439182427
0 6:0.793642942754
0 7:0.698712550585
0 8:0.792859773131
1 2:0.755708153968
1 3:0.825107251233
1 4:0.793495123149
1 5:0.634447132386
1 6:0.5405800192
1 7:0.613889630958
1 8:0.706647219168
2 3:0.248495114724
2 4:0.306278294487
2 5:0.248632190372
2 6:0.435500035217
2 7:0.401081947966
2 8:0.479948312838
3 4:0.333263058063
3 5:0.460478394477
3 6:0.600292350425
3 7:0.39263253882
3 8:0.580804068216
4 5:0.437139917416
4 6:0.430886846381
4 7:0.492627433416
4 8:0.655415951163
5 6:0.323204713222
5 7:0.452456912527
5 8:0.460418088119
6 7:0.575449606707
6 8:0.647380455704
7 8:0.534512356263
</hsp>