sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2ZJR-X209-X363
X
>2UXC-A700-A711
X
>3OHJ-A214-A444
X
>3OI1-A214-A444
X
>3OHZ-A214-A444
X
>3OH7-A685-A808
X
>3OH5-A214-A444
X
>3OH7-A214-A444
X
</seq>
<hsp>
0 1:1.0
0 2:0.85030632195
0 3:0.789498198676
0 4:0.788633617263
0 5:0.886250424463
0 6:0.865698218905
0 7:0.807781317604
1 2:0.514163435581
1 3:0.483739022598
1 4:0.489017989155
1 5:0.850428058165
1 6:0.614576942064
1 7:0.61745943289
2 3:0.33928555174
2 4:0.301129080187
2 5:0.620628661476
2 6:0.32363406653
2 7:0.343620130776
3 4:0.058685144267
3 5:0.684305825059
3 6:0.427172599299
3 7:0.400341442214
4 5:0.676872551952
4 6:0.40962894781
4 7:0.388627832983
5 6:0.340470637189
5 7:0.344114691539
6 7:0.0879995033072
</hsp>