sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCR-0999-0917
X
>2QA4-0998-0916
X
>1YJN-0999-0917
X
>1VQ6-0999-0917
X
>2OTJ-0999-0917
X
>1N8R-A999-A917
X
>1YIT-0999-0917
X
>1YJ9-0999-0917
X
>1Q86-A999-A917
X
>3CCS-0999-0917
X
>1K8A-A999-A917
X
</seq>
<hsp>
0 1:0.756496087942
0 2:0.753954821032
0 3:0.523908711457
0 4:0.706765541301
0 5:0.687023894639
0 6:0.618884713987
0 7:0.816785809418
0 8:0.887777461994
0 9:0.755465476511
0 10:0.965264571419
1 2:0.93692168211
1 3:0.853304118007
1 4:0.857891586737
1 5:0.807277997687
1 6:0.787276647395
1 7:1.0
1 8:0.887280808706
1 9:0.802008966616
1 10:0.859994242266
2 3:0.575939634946
2 4:0.46810429706
2 5:0.510873620591
2 6:0.438117137981
2 7:0.468701233203
2 8:0.556356681289
2 9:0.503491584233
2 10:0.651881536597
3 4:0.328091639225
3 5:0.401840997366
3 6:0.291328528926
3 7:0.389244661201
3 8:0.5008935787
3 9:0.402783559322
3 10:0.648393416244
4 5:0.282802829641
4 6:0.304634950482
4 7:0.199681858484
4 8:0.252637340862
4 9:0.256322752494
4 10:0.460910846016
5 6:0.335480037525
5 7:0.325154885123
5 8:0.358365248522
5 9:0.268313628945
5 10:0.364314229786
6 7:0.309949233736
6 8:0.469853002906
6 9:0.399320353706
6 10:0.579452627852
7 8:0.322436494221
7 9:0.346188477551
7 10:0.49897741576
8 9:0.196267863856
8 10:0.292134904867
9 10:0.281880419114
</hsp>