sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5D-11503-11498
X
>3R8T-A844-A925
X
>2ZJR-X363-X210
X
>3OGE-A1177-A933
X
>3OGY-A1177-A933
X
>3F1E-A1177-A933
X
>3F1G-A1177-A933
X
>3OHY-A1177-A933
X
>3OI0-A1177-A933
X
>3OHC-A1177-A933
X
>3OHD-A1177-A933
X
</seq>
<hsp>
0 1:0.596857492783
0 2:0.671647301869
0 3:0.834455812903
0 4:0.843577960951
0 5:0.881532017584
0 6:0.87705237561
0 7:0.793028967942
0 8:0.79181005137
0 9:0.796386229577
0 10:0.807139472124
1 2:0.913484555756
1 3:0.579602138347
1 4:0.589183924829
1 5:0.66027537494
1 6:0.664992629119
1 7:0.579708411412
1 8:0.581870417825
1 9:0.601090736122
1 10:0.612690727297
2 3:0.996272184088
2 4:1.0
2 5:0.948545850566
2 6:0.950904105658
2 7:0.939665188794
2 8:0.931376483973
2 9:0.887410716138
2 10:0.888684560281
3 4:0.0152115302884
3 5:0.213767240338
3 6:0.200380708843
3 7:0.113660713861
3 8:0.118888104863
3 9:0.181105618046
3 10:0.183590116774
4 5:0.2057986028
4 6:0.192207988594
4 7:0.114633888835
4 8:0.119301952141
4 9:0.178239835571
4 10:0.179621260143
5 6:0.0298869232046
5 7:0.198326327196
5 8:0.194536803975
5 9:0.12550689086
5 10:0.118259838055
6 7:0.18237791508
6 8:0.178738083947
6 9:0.120435632638
6 10:0.112453774607
7 8:0.0149426959162
7 9:0.135416945117
7 10:0.137841587141
8 9:0.12558417044
8 10:0.127618833444
9 10:0.016970557419
</hsp>