sequences=10
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1G-A387-A32
X
>3OHD-A387-A32
X
>3F1E-A387-A32
X
>3OHC-A387-A32
X
>3OGY-A387-A32
X
>3OGE-A387-A32
X
>3KNH-A378-A32
X
>3OI0-A387-A32
X
>3OHY-A387-A32
X
>3R8S-A844-A925
X
</seq>
<hsp>
0 1:0.459400529712
0 2:0.0363301601718
0 3:0.432582580133
0 4:0.335335409255
0 5:0.333905836521
0 6:0.512516635142
0 7:0.544332094316
0 8:0.543525034261
0 9:0.83825488899
1 2:0.467857669969
1 3:0.0416761657316
1 4:0.242196152297
1 5:0.252052320152
1 6:0.71877096332
1 7:0.358274416424
1 8:0.373316692344
1 9:1.0
2 3:0.441943310262
2 4:0.338905156087
2 5:0.338165516039
2 6:0.507866090608
2 7:0.553000043689
2 8:0.552184927328
2 9:0.838002367056
3 4:0.213628356075
3 5:0.220708536356
3 6:0.69811319065
3 7:0.345221531164
3 8:0.357285766646
3 9:0.974397662731
4 5:0.0317800334429
4 6:0.681238122122
4 7:0.373679297453
4 8:0.371782959817
4 9:0.923188673356
5 6:0.673727277718
5 7:0.37653098419
5 8:0.372824787602
5 9:0.915999401924
6 7:0.84234481745
6 8:0.837704779959
6 9:0.731322071691
7 8:0.0393475878594
7 9:0.840538331465
8 9:0.821976940293
</hsp>