sequences=20
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2ZJR-X2480-X2481
X
>2J00-A614-A615
X
>3F1G-A1050-A1051
X
>3KNK-B7-B8
X
>3IQN-A80-A81
X
>3IQN-A66-A67
X
>1TTT-D40-D41
X
>3KNK-A585-A586
X
>3OH5-A566-A567
X
>3IQR-A66-A67
X
>3CCS-917-918
X
>1FFK-01194-01195
X
>3CCJ-0515-0516
X
>1KD1-A1309-A1310
X
>2QA4-01069-01070
X
>2OTL-01309-01310
X
>3CCQ-01309-01310
X
>2OTJ-01309-01310
X
>3CCV-01309-01310
X
>3G71-01309-01310
X
</seq>
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