sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHK-A675-A676
X
>2QEX-01490-01491
X
>3CPW-01490-01491
X
>1VQP-01490-01491
X
>2CKY-A46-A47
X
>2QA4-01953-01954
X
>3U5H-52357-52358
X
>2OTJ-0810-0811
X
>1K9M-A1490-A1491
X
>3G71-0810-0811
X
>3OHK-A489-A490
X
>3CC2-01490-01491
X
>2QA4-0469-0470
X
>1YI2-01490-01491
X
>2ZJR-X713-X714
X
>3CCR-01954-01955
X
</seq>
<hsp>
0 1:0.805085926413
0 2:0.698719787159
0 3:0.729407817073
0 4:0.702276794731
0 5:0.881199818642
0 6:0.771903382127
0 7:0.759576863322
0 8:0.736049519801
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0 10:0.739820404322
0 11:0.786740203369
0 12:0.789340055454
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0 15:0.999998936397
1 2:0.196589892749
1 3:0.134632491619
1 4:0.358320169278
1 5:0.252756186913
1 6:0.262842372326
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1 10:0.383577931832
1 11:0.23209841874
1 12:0.513753956052
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1 15:0.452030704435
2 3:0.103129257201
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3 4:0.371037621951
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3 6:0.183610000126
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3 14:0.267602683831
3 15:0.413525321265
4 5:0.302703979159
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7 12:0.301430395129
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8 9:0.330027704598
8 10:0.37994846476
8 11:0.105059612447
8 12:0.4021282862
8 13:0.109102528573
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8 15:0.405934684655
9 10:0.562796620003
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10 11:0.339897191427
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10 13:0.314687981656
10 14:0.3692210019
10 15:0.354007639508
11 12:0.353814867492
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11 15:0.323585821301
12 13:0.339950702858
12 14:0.30930547513
12 15:0.391181753133
13 14:0.135449114972
13 15:0.307640786629
14 15:0.291690719479
</hsp>