sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1Z43-A35-A36
X
>1KD1-A2512-A2513
X
>3G78-A2-A3
X
>1JJ2-02512-02513
X
>1S72-02512-02513
X
>2UXC-A494-A495
X
>2OTL-02512-02513
X
>2QEX-02512-02513
X
>3CC2-02512-02513
X
>3CD6-02512-02513
X
>2OTJ-02512-02513
X
>3CCV-02512-02513
X
>3CC4-02512-02513
X
</seq>
<hsp>
0 1:0.894378981934
0 2:0.503167029483
0 3:0.827748017404
0 4:0.846110535299
0 5:0.999986923521
0 6:0.758145128896
0 7:0.959794477184
0 8:0.835833690042
0 9:0.63240882452
0 10:0.831832522145
0 11:0.736225127268
0 12:0.733403546156
1 2:0.730571656767
1 3:0.267554084386
1 4:0.276667050684
1 5:0.777876552204
1 6:0.303342844924
1 7:0.363039518207
1 8:0.344735040129
1 9:0.724585357143
1 10:0.434245277102
1 11:0.640727137007
1 12:0.523067155811
2 3:0.702639831126
2 4:0.699385976961
2 5:0.976166344952
2 6:0.619929670023
2 7:0.84528296075
2 8:0.652047009966
2 9:0.462076816327
2 10:0.575445020465
2 11:0.546988188675
2 12:0.55162507464
3 4:0.0545191941254
3 5:0.572231023704
3 6:0.236799201964
3 7:0.195772109438
3 8:0.179736302242
3 9:0.576641090843
3 10:0.3763216096
3 11:0.501761544362
3 12:0.354038322887
4 5:0.588364317482
4 6:0.240003315302
4 7:0.19046133337
4 8:0.154181552719
4 9:0.558935841393
4 10:0.347225201984
4 11:0.486039210904
4 12:0.328860949488
5 6:0.566082878614
5 7:0.567164993307
5 8:0.551035758419
5 9:0.768447729847
5 10:0.675246440969
5 11:0.617807913932
5 12:0.606296232338
6 7:0.342171583633
6 8:0.210733518862
6 9:0.541740219068
6 10:0.273364421516
6 11:0.418870549079
6 12:0.33044074443
7 8:0.290192417907
7 9:0.680063110297
7 10:0.467659602708
7 11:0.593237393779
7 12:0.44976968141
8 9:0.493274099448
8 10:0.221102550913
8 11:0.367545924573
8 12:0.242842543276
9 10:0.461732003703
9 11:0.276574590059
9 12:0.263596728172
10 11:0.301090564398
10 12:0.257924191049
11 12:0.206536208563
</hsp>