sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1K9M-A2009-A523
X
>1VQ7-02009-0523
X
>1VQO-02009-0523
X
>1FFK-01962-0522
X
>3CCE-02009-0523
X
>1YI2-02009-0523
X
>3CCU-02009-0523
X
>3CC7-02009-0523
X
>1VQ5-02009-0523
X
>1YJ9-02009-0523
X
>2OTL-02009-0523
X
>2QUW-D11-D9
X
</seq>
<hsp>
0 1:0.201024389217
0 2:0.224158331724
0 3:0.148050467568
0 4:0.242188735747
0 5:0.229348867956
0 6:0.295723874149
0 7:0.233624434351
0 8:0.242580896618
0 9:0.220873707198
0 10:0.239552761258
0 11:0.999999628254
1 2:0.183605396483
1 3:0.110491252904
1 4:0.128170220682
1 5:0.256287431454
1 6:0.173505681652
1 7:0.147802903458
1 8:0.147344333273
1 9:0.200083006292
1 10:0.211376857903
1 11:0.923001050091
2 3:0.17272479636
2 4:0.144285473745
2 5:0.34573379964
2 6:0.195340245688
2 7:0.177057649366
2 8:0.20134086443
2 9:0.275236175592
2 10:0.246735246381
2 11:0.90447151453
3 4:0.130970878838
3 5:0.199534562348
3 6:0.191715013396
3 7:0.111281002453
3 8:0.138048271389
3 9:0.171101730714
3 10:0.151770960545
3 11:0.942390322183
4 5:0.309863395086
4 6:0.152612736664
4 7:0.134961388731
4 8:0.17706933667
4 9:0.239654568743
4 10:0.233172631349
4 11:0.912755120878
5 6:0.355784920314
5 7:0.262185059307
5 8:0.210792913882
5 9:0.154115309288
5 10:0.174522198586
5 11:0.930229016854
6 7:0.116392423872
6 8:0.228866036208
6 9:0.298787274062
6 10:0.246956458311
6 11:0.91604954354
7 8:0.147318778613
7 9:0.217724383658
7 10:0.140134729565
7 11:0.910159473978
8 9:0.162180742472
8 10:0.120090690601
8 11:0.847507682051
9 10:0.15502337942
9 11:0.847756398833
10 11:0.872174373101
</hsp>