sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHZ-A104-A105
X
>2VQE-A877-A878
X
>3F1F-A104-A105
X
>3OI0-A877-A878
X
>2VQF-A877-A878
X
>1N32-A877-A878
X
>2UUB-A877-A878
X
</seq>
<hsp>
0 1:0.988851136058
0 2:0.895545093804
0 3:0.850145040974
0 4:0.999995601195
0 5:0.879210226715
0 6:0.890498850428
1 2:0.792865579861
1 3:0.473373660838
1 4:0.267074851085
1 5:0.414650370099
1 6:0.399557817232
2 3:0.681978113031
2 4:0.695143725163
2 5:0.848355630432
2 6:0.896389387597
3 4:0.457213139437
3 5:0.486909641584
3 6:0.445940217982
4 5:0.306593168154
4 6:0.351690769868
5 6:0.128326774135
</hsp>