sequences=15
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1VQ5-02086-02087
X
>1M90-A547-A548
X
>1H3E-B31-B32
X
>4TRA-A58-A59
X
>2QA4-01979-01980
X
>3U5D-12823-12824
X
>1Q82-A481-A482
X
>1Q81-A547-A548
X
>2QA4-02085-02086
X
>6TNA-A58-A59
X
>3B4A-B110-B111
X
>1YI2-0481-0482
X
>1YIT-0481-0482
X
>3U5H-543-544
X
>1N8R-A160-A161
X
</seq>
<hsp>
0 1:0.554035036819
0 2:0.719891997599
0 3:1.0
0 4:0.570399853471
0 5:0.592944340648
0 6:0.622483324222
0 7:0.661233780975
0 8:0.278000618341
0 9:0.632701757542
0 10:0.759650739126
0 11:0.598740845179
0 12:0.529082534216
0 13:0.704617197882
0 14:0.654406179126
1 2:0.64794563755
1 3:0.885223678621
1 4:0.57421454897
1 5:0.351823155867
1 6:0.383962107307
1 7:0.184894677181
1 8:0.637847349608
1 9:0.644033680508
1 10:0.36658570335
1 11:0.485450728086
1 12:0.41695484684
1 13:0.667633769664
1 14:0.646945532814
2 3:0.718497838752
2 4:0.420271778454
2 5:0.457109870858
2 6:0.616618456717
2 7:0.743915961829
2 8:0.576886259327
2 9:0.699257508746
2 10:0.65443205376
2 11:0.722682382204
2 12:0.630799482527
2 13:0.795544797366
2 14:0.78823393529
3 4:0.494113940011
3 5:0.569771701091
3 6:0.622003708556
3 7:0.922947794862
3 8:0.976215249438
3 9:0.50331399413
3 10:0.708845727695
3 11:0.669854044616
3 12:0.729532785207
3 13:0.565369223637
3 14:0.688863457397
4 5:0.295324895173
4 6:0.44487411846
4 7:0.666628392008
4 8:0.523047588509
4 9:0.393494239104
4 10:0.550425703412
4 11:0.49795427692
4 12:0.470687213662
4 13:0.498278612841
4 14:0.535651420039
5 6:0.296896773591
5 7:0.441256666928
5 8:0.591709100154
5 9:0.466761339643
5 10:0.340749989186
5 11:0.444330158022
5 12:0.399155695709
5 13:0.522693738571
5 14:0.56090553679
6 7:0.373684545122
6 8:0.672352665422
6 9:0.384933933499
6 10:0.305670656998
6 11:0.275399209135
6 12:0.242423597571
6 13:0.416391030776
6 14:0.428191181488
7 8:0.744514471753
7 9:0.671736725871
7 10:0.293602035751
7 11:0.467335325578
7 12:0.393558583492
7 13:0.651937082443
7 14:0.616624753268
8 9:0.708153798712
8 10:0.780973170456
8 11:0.709106140008
8 12:0.594879474141
8 13:0.782283277028
8 14:0.732300485472
9 10:0.567938060436
9 11:0.256536461784
9 12:0.362506173155
9 13:0.206539605662
9 14:0.280006686236
10 11:0.42237488695
10 12:0.359483156652
10 13:0.51891297354
10 14:0.516852106575
11 12:0.187483754302
11 13:0.250196278007
11 14:0.223269521986
12 13:0.356549855999
12 14:0.27956355317
13 14:0.173089925955
</hsp>