sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3Q51-A5-A6
X
>2QA4-0158-0159
X
>3CC4-02431-02432
X
>2QA4-02430-02431
X
>3R8T-A199-A200
X
>3OH5-A2712-A2713
X
>3OHJ-A2712-A2713
X
>1YJ9-0663-0664
X
>3CCR-02431-02432
X
>3CC4-0663-0664
X
>1K8A-A663-A664
X
>1N8R-A663-A664
X
>3CPW-0663-0664
X
>1VQN-0663-0664
X
</seq>
<hsp>
0 1:0.522672518137
0 2:0.390882780253
0 3:0.840201629848
0 4:0.978370296134
0 5:0.343607511828
0 6:0.357186998284
0 7:0.703405669657
0 8:0.948512225089
0 9:0.624110022778
0 10:0.786860602203
0 11:0.727953787439
0 12:0.611844846674
0 13:0.6334470864
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1 3:0.699756554934
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1 5:0.409286135712
1 6:0.462143162311
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1 9:0.447993160426
1 10:0.579623532657
1 11:0.491070587681
1 12:0.478480953358
1 13:0.532345203328
2 3:0.5815789709
2 4:0.769839767868
2 5:0.463141897552
2 6:0.426415206878
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2 8:0.738053919057
2 9:0.376984674677
2 10:0.514041764141
2 11:0.502970628304
2 12:0.299881284606
2 13:0.417955975864
3 4:0.56439637762
3 5:0.824418564477
3 6:0.72867689351
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3 8:0.663113546885
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3 13:0.404457569437
4 5:0.999998858
4 6:0.847349138271
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4 8:0.815151178015
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4 10:0.741271842932
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5 12:0.589278345805
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7 8:0.446397455236
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7 12:0.2433517731
7 13:0.233478270706
8 9:0.439371834005
8 10:0.291113910897
8 11:0.368467060798
8 12:0.579746613967
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9 11:0.264226844066
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10 11:0.240290860216
10 12:0.378017412366
10 13:0.38047802765
11 12:0.304702069764
11 13:0.289460103689
12 13:0.230235094959
</hsp>