sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1Q86-A2510-A2511
X
>3CME-02635-02636
X
>3OL9-F5-F6
X
>3I56-02510-02511
X
>3DIX-A168-A169
X
>1TN2-A11-A12
X
>3CME-02174-02175
X
>3G6E-02174-02175
X
>1YI2-02174-02175
X
>1YJ9-02174-02175
X
>1YI2-02635-02636
X
>3DIZ-A168-A169
X
>1VQ4-02635-02636
X
>1VQO-02635-02636
X
</seq>
<hsp>
0 1:0.705785561588
0 2:0.78441068311
0 3:0.445984382492
0 4:0.691889577284
0 5:0.934865387488
0 6:0.574932820381
0 7:0.670034360396
0 8:0.642541743313
0 9:0.529454448522
0 10:0.671088017133
0 11:0.691868943916
0 12:0.588727340213
0 13:0.680865575357
1 2:0.801657558418
1 3:0.856639643122
1 4:0.701931862527
1 5:0.690583372829
1 6:0.676633600479
1 7:0.635492885925
1 8:0.662065234272
1 9:0.61635410443
1 10:0.548735464397
1 11:0.396282245072
1 12:0.527467819321
1 13:0.522355265163
2 3:0.968109338902
2 4:0.593509825385
2 5:0.999993095023
2 6:0.733360577604
2 7:0.344027012796
2 8:0.582377433223
2 9:0.478964517579
2 10:0.582394989685
2 11:0.669892687335
2 12:0.566391343882
2 13:0.672618305745
3 4:0.636874715811
3 5:0.821153568059
3 6:0.657561956259
3 7:0.768794047991
3 8:0.587781669842
3 9:0.623343565589
3 10:0.697174134665
3 11:0.72752220701
3 12:0.681778130767
3 13:0.712209617737
4 5:0.657725391326
4 6:0.555285998508
4 7:0.310924505136
4 8:0.177092302024
4 9:0.246059950568
4 10:0.347234774926
4 11:0.40023318869
4 12:0.36640523457
4 13:0.366445250319
5 6:0.90674529719
5 7:0.803566629951
5 8:0.657478117288
5 9:0.709072191503
5 10:0.570837247702
5 11:0.583996987662
5 12:0.645288782863
5 13:0.51477217704
6 7:0.489512499789
6 8:0.431499383382
6 9:0.521886007774
6 10:0.476923849742
6 11:0.482494746413
6 12:0.398436238258
6 13:0.53368905772
7 8:0.283136109644
7 9:0.25770602388
7 10:0.365832192854
7 11:0.404947902991
7 12:0.34584044621
7 13:0.446089848373
8 9:0.283003374913
8 10:0.275558745346
8 11:0.341600472358
8 12:0.302924999202
8 13:0.352659246802
9 10:0.359656944025
9 11:0.420406682525
9 12:0.301044607729
9 13:0.356660916746
10 11:0.241864672875
10 12:0.158635936224
10 13:0.187705470117
11 12:0.28499244554
11 13:0.284741343154
12 13:0.179657091358
</hsp>