sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1QVG-02491-02492
X
>3R8T-A2223-A2224
X
>2OTJ-01225-01226
X
>3R8N-V65-V66
X
>1YJ9-01873-01874
X
>3CCQ-01225-01226
X
>2OTL-0298-0299
X
>3U5F-6719-6720
X
>1YJ9-01144-01145
X
>2OTJ-01144-01145
X
>1VQM-01144-01145
X
</seq>
<hsp>
0 1:0.582978271439
0 2:0.574926931638
0 3:0.805339388933
0 4:0.577310727471
0 5:0.47325425917
0 6:0.743912211439
0 7:0.700444797865
0 8:0.693153890565
0 9:1.0
0 10:0.941432107781
1 2:0.373597605696
1 3:0.806985180659
1 4:0.382983815904
1 5:0.370283109577
1 6:0.655442536249
1 7:0.47961956731
1 8:0.342758352283
1 9:0.542355757433
1 10:0.591374649428
2 3:0.848099060376
2 4:0.248749448619
2 5:0.160866715291
2 6:0.688925327331
2 7:0.571424388553
2 8:0.587367667937
2 9:0.753476509006
2 10:0.791138457423
3 4:0.629316829618
3 5:0.772767842639
3 6:0.254186981385
3 7:0.379235828997
3 8:0.775763866869
3 9:0.854483689784
3 10:0.795569683723
4 5:0.264342886938
4 6:0.475353009544
4 7:0.373499311242
4 8:0.550252099062
4 9:0.693362694607
4 10:0.726899112972
5 6:0.625636900701
5 7:0.520445336643
5 8:0.570947422822
5 9:0.765933063916
5 10:0.768929092616
6 7:0.28241614779
6 8:0.693342114667
6 9:0.758419003083
6 10:0.752943142483
7 8:0.487487955016
7 9:0.565702825087
7 10:0.54551244684
8 9:0.343729810919
8 10:0.311414754079
9 10:0.236065392393
</hsp>