sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2UXC-A1277-A1279
X
>3G9C-R100-R101
X
>3CCJ-0158-0159
X
>1YJ9-0158-0159
X
>1VQL-0158-0159
X
>1VQ4-02431-02432
X
>3CC4-0158-0159
X
>3CMA-0158-0159
X
</seq>
<hsp>
0 1:0.874697182868
0 2:0.882088040217
0 3:0.899098405602
0 4:0.951453688023
0 5:0.999995506635
0 6:0.907147449499
0 7:0.984266820045
1 2:0.642921448931
1 3:0.461166572726
1 4:0.501197749939
1 5:0.543508319578
1 6:0.529801315454
1 7:0.514647889586
2 3:0.570773355821
2 4:0.664189759501
2 5:0.820840390348
2 6:0.673330320144
2 7:0.688409804444
3 4:0.192640869606
3 5:0.324950504256
3 6:0.208523483846
3 7:0.276108409787
4 5:0.204230336723
4 6:0.10334115895
4 7:0.162328505151
5 6:0.188532717688
5 7:0.199255690027
6 7:0.143825304452
</hsp>