ClaRNA

Doublet Group info: classifier/stacking/>>/UA/sub-006

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: >>/UA/sub-006
Members:
count: 34
download members
1XJR:A36:A37
1Q81:A1716:A1717
1I6U:D8:D9
1YJW:01716:01717
1VQO:01716:01717
1Q82:A221:A222
3EGZ:B58:B59
3CC4:0221:0222
2QEX:0221:0222
3CPW:0221:0222
1K8A:A221:A222
3CXC:0221:0222
3G71:0221:0222
1M90:A221:A222
1VQ7:0221:0222
3G6E:0221:0222
3I56:0221:0222
1VQM:0221:0222
3CCJ:01716:01717
2OTJ:0221:0222
3CCE:0221:0222
1VQL:0221:0222
1VQ6:0221:0222
3CCU:0221:0222
1NJI:A221:A222
3CCR:0221:0222
1YHQ:0221:0222
1VQ9:0221:0222
3CD6:0221:0222
3CCS:0221:0222
1YI2:0221:0222
1VQ8:0221:0222
1VQK:0221:0222
1VQO:0221:0222
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/<< 47 0.055
stacking/>< 33 0.074
stacking/>> 41 0.137
base-ribose/H_0BR 5 0.145
base-ribose/W_4BR 14 0.217
base-phosphate/W_5BPh 6 0.306
base-ribose/W_5BR 10 0.312
base-phosphate/H_9BPh 3 0.314
base-ribose/H_9BR 12 0.349
base-phosphate/W_3BPh 8 0.392

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol