sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1F8V-R12-R13
X
>3R8T-A153-A154
X
>1RNA-A3-A4
X
>3KNH-A782-A783
X
>3R8T-A823-A824
X
>3OHD-A349-A350
X
>3NCU-C5-C6
X
>3CCS-02544-02545
X
>3CCQ-02527-02528
X
>3OHY-A349-A350
X
>3SKZ-B5-B6
X
>3F1E-A349-A350
X
>3F1G-A349-A350
X
</seq>
<hsp>
0 1:0.604437528295
0 2:0.684762355703
0 3:0.742070622693
0 4:0.673176047286
0 5:0.785125995258
0 6:0.786058888645
0 7:0.772038462165
0 8:0.781229594308
0 9:0.76760806474
0 10:0.877567006766
0 11:0.999993792549
0 12:0.999686270341
1 2:0.447007148102
1 3:0.445483838573
1 4:0.232650675672
1 5:0.557963164213
1 6:0.548815782913
1 7:0.465947629883
1 8:0.598064497673
1 9:0.576636277087
1 10:0.637456416538
1 11:0.759116892296
1 12:0.758996526595
2 3:0.268259778767
2 4:0.40973305029
2 5:0.367114471597
2 6:0.357896522958
2 7:0.420167968743
2 8:0.463735229754
2 9:0.360590765398
2 10:0.514519627401
2 11:0.66395265722
2 12:0.658968598932
3 4:0.424652835863
3 5:0.365796457584
3 6:0.379012228875
3 7:0.339343293847
3 8:0.460143583262
3 9:0.290896180591
3 10:0.455783533368
3 11:0.585847860132
3 12:0.584722036769
4 5:0.41663248121
4 6:0.395512111867
4 7:0.330026001701
4 8:0.44489149288
4 9:0.456771175933
4 10:0.467715126072
4 11:0.585247074253
4 12:0.581045244206
5 6:0.106886577497
5 7:0.191252456515
5 8:0.143958862209
5 9:0.156061277139
5 10:0.191325155704
5 11:0.318870794334
5 12:0.315771428909
6 7:0.240976032354
6 8:0.150886047052
6 9:0.190299575763
6 10:0.191374435329
6 11:0.339294708272
6 12:0.33786122444
7 8:0.249944937724
7 9:0.226836325092
7 10:0.231981723995
7 11:0.330688286324
7 12:0.326456522877
8 9:0.232575012314
8 10:0.163183990931
8 11:0.272337799281
8 12:0.275943205579
9 10:0.218867370663
9 11:0.35416116763
9 12:0.351254836896
10 11:0.16704285016
10 12:0.166661075831
11 12:0.0308880293601
</hsp>