sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3P59-A10-A11
X
>3OH7-A1831-A1832
X
>3OH5-A1831-A1832
X
>3U5H-51002-51003
X
>3U5B-21536-21537
X
>3OHZ-A1733-A1734
X
>3KNK-A1830-A1831
X
>3U5D-1996-1997
X
>3F1G-Z36-Z37
X
</seq>
<hsp>
0 1:0.79385496235
0 2:0.793664496648
0 3:0.636986484258
0 4:0.79427620409
0 5:0.861248595428
0 6:1.0
0 7:0.524059670638
0 8:0.590777035111
1 2:0.0318658750061
1 3:0.752098552069
1 4:0.735939612543
1 5:0.878248966348
1 6:0.987165633661
1 7:0.569277426032
1 8:0.976921507117
2 3:0.747207376118
2 4:0.734861604904
2 5:0.880374091739
2 6:0.985451237427
2 7:0.569155348746
2 8:0.974517333471
3 4:0.695217290373
3 5:0.493390359073
3 6:0.491894146586
3 7:0.365667227498
3 8:0.512281258511
4 5:0.457476352026
4 6:0.740851669923
4 7:0.553927402959
4 8:0.738406725447
5 6:0.397827951728
5 7:0.513843269188
5 8:0.610615532928
6 7:0.571191689775
6 8:0.590171112607
7 8:0.439440570454
</hsp>