sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2VQE-A972-A973
X
>1FJG-A972-A973
X
>3R8N-A152-A153
X
>3MUR-R70-R71
X
>3KNI-A1956-A1957
X
>3OI0-A1211-A1212
X
>3OHY-A1211-A1212
X
>3OGY-A1211-A1212
X
</seq>
<hsp>
0 1:0.200598921815
0 2:0.569498613922
0 3:0.424153111489
0 4:0.561042278627
0 5:0.854056421536
0 6:0.851636106277
0 7:1.0
1 2:0.600322047201
1 3:0.389480881158
1 4:0.532324159935
1 5:0.790193535354
1 6:0.788337389675
1 7:0.928120222078
2 3:0.319130934351
2 4:0.637652756946
2 5:0.862181237942
2 6:0.854971716454
2 7:0.923151884402
3 4:0.400927617315
3 5:0.692624511871
3 6:0.68655385421
3 7:0.758206754303
4 5:0.479963186965
4 6:0.474819040348
4 7:0.530914352795
5 6:0.0158245500877
5 7:0.23460589423
6 7:0.229528325237
</hsp>