sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNI-A835-A2335
X
>3F1H-A847-A2414
X
>3OI1-A835-A2260
X
>3OHZ-A835-A2260
X
>3OH5-A835-A2260
X
>3OH7-A835-A2260
X
</seq>
<hsp>
0 1:1.0
0 2:0.613488274552
0 3:0.671627671471
0 4:0.792850857425
0 5:0.796170667157
1 2:0.585374639975
1 3:0.629176563566
1 4:0.645765636283
1 5:0.631820182839
2 3:0.161788503251
2 4:0.445296164042
2 5:0.456148094959
3 4:0.427949565197
3 5:0.452467361956
4 5:0.0596290489943
</hsp>