ClaRNA

Doublet Group info: classifier/stacking/>>/UU/sub-002

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: >>/UU/sub-002
Members:
count: 82
download members
1EUY:B50:B51
3R8O:A469:A470
3U5F:6255:6257
1Q82:A2646:A2647
3R8S:A2485:A2486
3R8N:A461:A462
2ZJR:X484:X485
3F1G:A1367:A1368
3OH7:A2322:A2323
3R8O:A1006:A1007
3G78:A123:A124
3SKZ:A40:A41
1Z79:A6:A7
1VQL:02227:02228
1VQ8:02123:02124
2UUB:A655:A656
2VQF:A1098:A1099
1YZD:A6:A7
1VQM:02386:02387
2CT8:D54:D55
3U5D:1899:1900
1O0B:B51:B52
1N8R:A2646:A2647
3CC2:02123:02124
2UUA:A1098:A1099
1Q81:A2646:A2647
3OGE:A1283:A1284
1FG0:A377:A378
1Q81:A2298:A2299
3P22:A8:A9
3U5D:11909:11910
1WVD:B1:B2
3P22:A9:A10
3P22:E9:E10
1VQ4:02123:02124
1K9M:A2386:A2387
3F4H:Y2:Y3
3R8T:A152:A153
1XMQ:A928:A929
1R9F:B14:B15
3R8S:A1555:A1556
1M90:A2123:A2124
3SKI:B51:B52
3CMA:02386:02387
3U5H:5174:5175
3CMA:02123:02124
3F4H:Y8:Y9
1VQP:01178:01179
2QEX:01305:01306
3P22:A10:A11
3U5H:51059:51060
1A34:C5:C6
1VQ9:01178:01179
2PLY:E4:E5
3CCQ:02123:02124
3ND3:A11:A12
3U5D:1410:1411
3CCM:01596:01597
2NZ4:R68:R69
1N38:C0:C1
2J03:A2369:A2370
1Z7F:C6:C7
3SUX:X81:X82
1Q81:A1178:A1179
3CC4:01178:01179
3U5D:1570:1571
1VQ9:0611:0612
3CCV:01596:01597
1VQK:01178:01179
3P22:E7:E8
3U5H:52751:52752
3G6E:02386:02387
1YJ9:02123:02124
3NMU:K3:K4
1A34:C3:C4
3CCM:0611:0612
1XMQ:A348:A349
1OOA:C5:C6
1JJ2:01178:01179
3ADD:C69:C70
2NZ4:S38:S39
1VQO:01596:01597
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/>> 67 0.057
stacking/<< 4 0.057
stacking/>< 64 0.113
base-ribose/H_0BR 3 0.141
base-ribose/W_5BR 10 0.143
base-ribose/H_9BR 12 0.143
base-phosphate/SW_2BPh 2 0.147
base-ribose/W_4BR 14 0.195
base-phosphate/H_9BPh 2 0.286
base-phosphate/W_5BPh 6 0.287

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol