sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1FJG-A1380-A1471
X
>2UUA-A1380-A1471
X
>3OHD-A1380-A1471
X
>3OHZ-A1955-A1081
X
>3OI1-A1955-A1081
X
>3Q51-A14-A26
X
>1DRZ-B20-B41
X
>3GX7-A29-A60
X
</seq>
<hsp>
0 1:0.234734892024
0 2:0.438641731786
0 3:0.542774760454
0 4:0.51400705453
0 5:0.685287332502
0 6:0.594666617274
0 7:0.6110123185
1 2:0.32545077445
1 3:0.426831052978
1 4:0.39132744411
1 5:0.708736720615
1 6:0.4730098388
1 7:0.607121430866
2 3:0.66526487619
2 4:0.627107870374
2 5:0.99999439609
2 6:0.598737772772
2 7:0.744241025884
3 4:0.060664566128
3 5:0.47920885093
3 6:0.400996498196
3 7:0.504215897197
4 5:0.504975845399
4 6:0.401913924245
4 7:0.509689643367
5 6:0.693991288787
5 7:0.629005994538
6 7:0.406597254005
</hsp>