sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2UUB-A1380-A1471
X
>3OGY-A1380-A1471
X
>3CCM-929-951
X
>3OI0-A1380-A1471
X
>3OHY-A1380-A1471
X
>3R8S-B30-B52
X
>1VQK-929-951
X
>3KNI-B30-B52
X
</seq>
<hsp>
0 1:0.593621821302
0 2:0.756615948385
0 3:0.58364364536
0 4:0.572997889161
0 5:0.84313823685
0 6:0.658779233387
0 7:0.885241868823
1 2:1.0
1 3:0.28659041456
1 4:0.290896605884
1 5:0.880435450533
1 6:0.898441849465
1 7:0.73369923038
2 3:0.920927088135
2 4:0.915511732428
2 5:0.575789109618
2 6:0.292122119731
2 7:0.740196310712
3 4:0.0468443123238
3 5:0.773035097597
3 6:0.832264768077
3 7:0.638468584528
4 5:0.781487488403
4 6:0.824644319783
4 7:0.622100686909
5 6:0.459342402461
5 7:0.694474499609
6 7:0.649400456283
</hsp>