sequences=15
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8S-A99-A98
X
>3I61-B3-B2
X
>3R8T-A99-A98
X
>3SQW-B2-B1
X
>3F1H-A1692-A1690
X
>3F1F-A1692-A1690
X
>3KNK-A1613-A1611
X
>3OH5-A1614-A1612
X
>3OH7-A1614-A1612
X
>3OHZ-A1614-A1612
X
>3OHJ-A1614-A1612
X
>3OHK-A1614-A1612
X
>3OI1-A1614-A1612
X
>2J02-A75-A74
X
>2J00-A75-A74
X
</seq>
<hsp>
0 1:0.914674921134
0 2:0.110018005883
0 3:0.914028834781
0 4:0.817480877813
0 5:0.816998614639
0 6:0.939262550114
0 7:0.878842535772
0 8:0.874179876722
0 9:0.875243525111
0 10:0.85983835592
0 11:0.858180916942
0 12:0.875105723927
0 13:0.999523119741
0 14:1.0
1 2:0.847533465144
1 3:0.0306692112673
1 4:0.847613772066
1 5:0.849167691241
1 6:0.9377185982
1 7:0.864703857661
1 8:0.867887786251
1 9:0.873548758359
1 10:0.861062192015
1 11:0.862927489407
1 12:0.871667876773
1 13:0.970177464505
1 14:0.970393824688
2 3:0.845222251847
2 4:0.827224631069
2 5:0.826142042082
2 6:0.937029258477
2 7:0.88297867477
2 8:0.878648624927
2 9:0.880194942051
2 10:0.864290766842
2 11:0.862753365101
2 12:0.880772772055
2 13:0.967569805688
2 14:0.968060885479
3 4:0.860015178395
3 5:0.861509913148
3 6:0.945391483561
3 7:0.874781939003
3 8:0.878134622665
3 9:0.883761249188
3 10:0.871779878568
3 11:0.873695400364
3 12:0.881955774134
3 13:0.947519782917
3 14:0.947719275706
4 5:0.00895570262565
4 6:0.215870497897
4 7:0.0970561328893
4 8:0.0966438632498
4 9:0.117641236376
4 10:0.0804582197522
4 11:0.0849639487408
4 12:0.122373949312
4 13:0.594994979434
4 14:0.595395422722
5 6:0.215484974109
5 7:0.0970047275096
5 8:0.0963301246795
5 9:0.117277516247
5 10:0.0774342488656
5 11:0.0812313449372
5 12:0.121910920746
5 13:0.593694768756
5 14:0.594102380745
6 7:0.132058288965
6 8:0.128852344048
6 9:0.120655934895
6 10:0.154818597395
6 11:0.154198187381
6 12:0.122931149759
6 13:0.438038454121
6 14:0.438256132391
7 8:0.0190700353467
7 9:0.0559580384071
7 10:0.0434369285357
7 11:0.0551712069749
7 12:0.0680107453656
7 13:0.539867472059
7 14:0.540189789166
8 9:0.0403099477999
8 10:0.0408822255221
8 11:0.0493189057191
8 12:0.0523485781228
8 13:0.533965226708
8 14:0.534278305945
9 10:0.0621963091113
9 11:0.0624183987898
9 12:0.0186402959275
9 13:0.517779880375
9 14:0.51806352079
10 11:0.0174249285411
10 12:0.0695164306454
10 13:0.552650600888
10 14:0.552991604426
11 12:0.0659291113423
11 13:0.549814071596
11 14:0.550161361206
12 13:0.518246144762
12 14:0.518534634059
13 14:0.00136676867435
</hsp>