sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5H-51644-51722
X
>3U5D-11638-11716
X
>3U5H-51407-51827
X
>3R8T-A685-A463
X
>3U5D-11401-11821
X
>3R8S-A685-A463
X
>3PU4-R10-R8
X
</seq>
<hsp>
0 1:0.0988633895997
0 2:0.132739077402
0 3:0.985110028458
0 4:0.130188758084
0 5:0.996313849027
0 6:0.958472894561
1 2:0.0913743844959
1 3:0.982448502342
1 4:0.0601365966368
1 5:0.99999886436
1 6:0.906302989692
2 3:0.967557643515
2 4:0.055635904954
2 5:0.978883167401
2 6:0.904896372807
3 4:0.974815767064
3 5:0.133223295528
3 6:0.802803890749
4 5:0.991646900768
4 6:0.890507400585
5 6:0.849949887999
</hsp>