sequences=20
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3GAO-A48-A47
X
>3CCS-978-977
X
>3OH5-A1847-A1846
X
>3OH7-A1847-A1846
X
>3GES-A48-A47
X
>3KNK-A473-A472
X
>2EEV-A48-A47
X
>3GOT-A48-A47
X
>3GOG-A47-A46
X
>3OI1-A473-A472
X
>2EEW-A48-A47
X
>3FO4-A46-A45
X
>3CCM-0577-0576
X
>3R8T-A458-A457
X
>1U8D-A48-A47
X
>2EET-A48-A47
X
>2EES-A48-A47
X
>2QA4-0577-0576
X
>3G71-0577-0576
X
>1VQ9-0347-0346
X
</seq>
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