sequences=19
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1YJ9-01079-01078
X
>3RKF-A48-A47
X
>3RKF-C48-C47
X
>3RKF-D48-D47
X
>3CCV-0577-0576
X
>3RKF-B48-B47
X
>3U5D-12081-12080
X
>3CCV-978-977
X
>480D-A9-A8
X
>3CD6-0577-0576
X
>1VQM-0347-0346
X
>3CCM-0347-0346
X
>1Q86-A577-A576
X
>3I56-0577-0576
X
>1VQ6-0577-0576
X
>1Q82-A577-A576
X
>3CC2-0577-0576
X
>3CC4-0577-0576
X
>3G6E-0577-0576
X
</seq>
<hsp>
0 1:0.675986911696
0 2:0.537217074116
0 3:0.642891946731
0 4:0.588442303972
0 5:0.500548874442
0 6:0.618834440131
0 7:0.571951376597
0 8:0.586948998776
0 9:0.690464475985
0 10:0.484318100555
0 11:0.734804189994
0 12:0.498386812593
0 13:0.536059445317
0 14:0.585918731643
0 15:0.578791973849
0 16:0.623648132867
0 17:0.511133629102
0 18:0.607054535062
1 2:0.39257036569
1 3:0.244351979099
1 4:0.700390301545
1 5:0.466861274524
1 6:0.544032783505
1 7:0.60983496444
1 8:0.69080919379
1 9:0.792651005727
1 10:0.647406671599
1 11:0.627025842776
1 12:0.90727793732
1 13:0.915637815369
1 14:0.934689662797
1 15:1.0
1 16:0.876690876626
1 17:0.843432867979
1 18:0.974518648788
2 3:0.26426741079
2 4:0.536279788083
2 5:0.164165040745
2 6:0.553344865486
2 7:0.537819665312
2 8:0.659885899649
2 9:0.633221576871
2 10:0.458408881433
2 11:0.623301598213
2 12:0.616564656558
2 13:0.68663228643
2 14:0.65492902682
2 15:0.746647014422
2 16:0.622148265508
2 17:0.601803357603
2 18:0.710349988864
3 4:0.568938067796
3 5:0.357467855142
3 6:0.522074348963
3 7:0.562199105846
3 8:0.653583610614
3 9:0.677064445957
3 10:0.594622544321
3 11:0.569425235298
3 12:0.820162443804
3 13:0.828505324949
3 14:0.841650370531
3 15:0.918221731273
3 16:0.771736992811
3 17:0.739388732723
3 18:0.866021181612
4 5:0.58830949699
4 6:0.399722921122
4 7:0.293090019914
4 8:0.325031918584
4 9:0.165025010035
4 10:0.418197745785
4 11:0.332722969402
4 12:0.555588368997
4 13:0.42299269835
4 14:0.550590185665
4 15:0.585185555476
4 16:0.455026059909
4 17:0.414883203012
4 18:0.50012024475
5 6:0.59961195318
5 7:0.560892228591
5 8:0.693980993679
5 9:0.689827342209
5 10:0.422071501166
5 11:0.676731439453
5 12:0.561435915008
5 13:0.664619262693
5 14:0.593028550994
5 15:0.690878831837
5 16:0.585802035764
5 17:0.575219029954
5 18:0.668956335044
6 7:0.234850408673
6 8:0.243175056952
6 9:0.411662022301
6 10:0.432516901945
6 11:0.251838115368
6 12:0.691278108332
6 13:0.559926950358
6 14:0.669841468527
6 15:0.679410862602
6 16:0.542746005798
6 17:0.503847962448
6 18:0.628969178376
7 8:0.190989336198
7 9:0.309366891364
7 10:0.283201927605
7 11:0.215059185227
7 12:0.558907760131
7 13:0.422124377638
7 14:0.525892713527
7 15:0.556158069758
7 16:0.419193822888
7 17:0.412090176121
7 18:0.509131730592
8 9:0.320354732594
8 10:0.433199459306
8 11:0.247680688171
8 12:0.645969379016
8 13:0.455230083769
8 14:0.624735518525
8 15:0.609692224752
8 16:0.511052079638
8 17:0.455301595077
8 18:0.560243018061
9 10:0.461778540472
9 11:0.328613390151
9 12:0.58453790839
9 13:0.406668445272
9 14:0.557574861327
9 15:0.578620163485
9 16:0.431914944412
9 17:0.415393442978
9 18:0.482348881952
10 11:0.475851624046
10 12:0.347127879708
10 13:0.351867905493
10 14:0.32485839084
10 15:0.403038704282
10 16:0.312824958983
10 17:0.347145952691
10 18:0.405729365301
11 12:0.749902955687
11 13:0.593559433978
11 14:0.708344860778
11 15:0.738991283105
11 16:0.571622792816
11 17:0.568841718978
11 18:0.667217091799
12 13:0.267401628143
12 14:0.150347882588
12 15:0.208554517795
12 16:0.306783788982
12 17:0.307103445253
12 18:0.268831428607
13 14:0.243960130922
13 15:0.190701723365
13 16:0.224142900218
13 17:0.179216992747
13 18:0.160691550661
14 15:0.162245376701
14 16:0.205833196549
14 17:0.280511374235
14 18:0.198277969918
15 16:0.247468825816
15 17:0.251040433319
15 18:0.152129432207
16 17:0.177387536447
16 18:0.158407840379
17 18:0.162655462851
</hsp>