sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3MIJ-A6-A3
X
>3R8S-A1460-A1539
X
>2J01-A2604-A2562
X
>2J03-A2604-A2562
X
>3OI1-A2557-A2515
X
>3KNK-A2632-A2590
X
>3OHZ-A2557-A2515
X
>3OH7-A2557-A2515
X
>3OH5-A2557-A2515
X
>3OHK-A2557-A2515
X
>3OHJ-A2557-A2515
X
</seq>
<hsp>
0 1:0.99999998898
0 2:0.772362638866
0 3:0.772579936921
0 4:0.799875459214
0 5:0.761248843994
0 6:0.799949682516
0 7:0.781254263253
0 8:0.782987474359
0 9:0.790248733629
0 10:0.789498211075
1 2:0.388153245529
1 3:0.387113500693
1 4:0.367603098827
1 5:0.390328208621
1 6:0.367670914314
1 7:0.371994246998
1 8:0.369600280149
1 9:0.362889542222
1 10:0.36399176885
2 3:0.00442929976647
2 4:0.0363569907521
2 5:0.0744208104118
2 6:0.0402260955938
2 7:0.0251794709568
2 8:0.0354404510177
2 9:0.0350368324231
2 10:0.0405310793709
3 4:0.0371661684534
3 5:0.0735382621314
3 6:0.0406610838621
3 7:0.0231978850132
3 8:0.0325479350695
3 9:0.0349192388913
3 10:0.0395586257217
4 5:0.0836037673439
4 6:0.0117978628323
4 7:0.0335971154735
4 8:0.0420215276546
4 9:0.0289147121662
4 10:0.0359972311251
5 6:0.0807298331833
5 7:0.0699501342808
5 8:0.0679958552288
5 9:0.0825290536493
5 10:0.0822292218755
6 7:0.0365969649712
6 8:0.0417066802352
6 9:0.0310988129988
6 10:0.0343356964306
7 8:0.0151038388478
7 9:0.0252608797263
7 10:0.0292364739996
8 9:0.0315625081835
8 10:0.0289343207506
9 10:0.0142748914309
</hsp>