sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH7-A1872-A1870
X
>3OHK-A1872-A1870
X
>3KNI-A1871-A1869
X
>3OHZ-A2290-A2288
X
>3OI1-A2290-A2288
X
>3OHK-A2290-A2288
X
>3OHJ-A2290-A2288
X
>3OH7-A2290-A2288
X
>3OH5-A2290-A2288
X
</seq>
<hsp>
0 1:0.0586441814764
0 2:0.346514305465
0 3:0.94093609261
0 4:0.931007391286
0 5:0.886605427322
0 6:0.891746771638
0 7:0.985866392274
0 8:0.99548502615
1 2:0.33190370528
1 3:0.946543487189
1 4:0.936292525764
1 5:0.892600011245
1 6:0.89740419592
1 7:0.9907201811
1 8:1.0
2 3:0.684975665509
2 4:0.672676733754
2 5:0.631512023232
2 6:0.634873888316
2 7:0.717701208985
2 8:0.726762545349
3 4:0.0211489910347
3 5:0.0708085667642
3 6:0.0667036210868
3 7:0.0792331886964
3 8:0.0824063190448
4 5:0.0598291339111
4 6:0.0537909163317
4 7:0.0821798577161
4 8:0.086901428834
5 6:0.0132884213408
5 7:0.117827348376
5 8:0.12602964967
6 7:0.11399197102
6 8:0.121774669754
7 8:0.0159223054612
</hsp>