sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2QA4-02564-01986
X
>3KNI-A2632-A2590
X
>3U5H-51215-51214
X
>3F1F-A2711-A2669
X
>3F1H-A2711-A2669
X
>3U5F-61789-61787
X
>3KNK-A829-A949
X
>3OH7-A830-A944
X
>3OH5-A830-A944
X
</seq>
<hsp>
0 1:0.49779141484
0 2:0.188894014841
0 3:0.517601505557
0 4:0.51629780304
0 5:0.753985845639
0 6:0.696961614789
0 7:0.707431221145
0 8:0.707351453648
1 2:0.334197110027
1 3:0.179390078126
1 4:0.175407922634
1 5:0.55852530219
1 6:0.886665161067
1 7:0.878253914109
1 8:0.874415913244
2 3:0.349433243995
2 4:0.348265508423
2 5:0.688786362498
2 6:0.710590788759
2 7:0.713421955138
2 8:0.711486046329
3 4:0.00820917706569
3 5:0.621133267378
3 6:0.814452146718
3 7:0.799476151152
3 8:0.794705675831
4 5:0.618605223772
4 6:0.815060685171
4 7:0.800634705264
4 8:0.795911347906
5 6:0.999997964958
5 7:0.972472414968
5 8:0.967810191872
6 7:0.107753468307
6 8:0.109914749754
7 8:0.00885629134252
</hsp>