sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2VQF-A162-A200
X
>2VQE-A162-A200
X
>1FJG-A162-A200
X
>1N32-A162-A200
X
>2UUB-A162-A200
X
>1XMQ-A162-A200
X
>2UXC-A162-A200
X
</seq>
<hsp>
0 1:0.549449088498
0 2:0.98192347365
0 3:1.0
0 4:0.765496175069
0 5:0.623611873469
0 6:0.794489736349
1 2:0.581566702472
1 3:0.69497979109
1 4:0.347302132789
1 5:0.373119112918
1 6:0.552032180286
2 3:0.696557267515
2 4:0.297288953537
2 5:0.69695172849
2 6:0.817642175537
3 4:0.71712934849
3 5:0.656869764616
3 6:0.62073753644
4 5:0.495371334283
4 6:0.671045897867
5 6:0.309148234196
</hsp>