sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3IBK-A5-A7
X
>3I56-02529-02530
X
>3U5H-581-582
X
>3R8T-A1705-A1706
X
>3OH7-A2095-A2096
X
>3CME-02529-02530
X
>3CMA-02529-02530
X
>3CCE-02529-02530
X
</seq>
<hsp>
0 1:0.878347035736
0 2:0.861343775273
0 3:0.780793474592
0 4:0.871623945377
0 5:0.833153166384
0 6:0.93021218101
0 7:1.0
1 2:0.302955601967
1 3:0.582820871837
1 4:0.405882851114
1 5:0.470824356649
1 6:0.211151782539
1 7:0.221764885111
2 3:0.672275260936
2 4:0.293570985267
2 5:0.274072187556
2 6:0.244846859579
2 7:0.280876400696
3 4:0.684861313353
3 5:0.64818500774
3 6:0.570675571049
3 7:0.72897974447
4 5:0.309223024528
4 6:0.359914779512
4 7:0.366758147616
5 6:0.324320775439
5 7:0.414313377513
6 7:0.187809116322
</hsp>