sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5B-2946-2945
X
>3DIL-A39-A38
X
>3DJ2-A39-A38
X
>3U5F-6958-6957
X
>3DIO-X39-X38
X
>3DIQ-A39-A38
X
>3D0X-A36-A35
X
</seq>
<hsp>
0 1:0.480384121172
0 2:0.61280234585
0 3:0.444804096496
0 4:0.655264100752
0 5:0.500988294543
0 6:0.404849366195
1 2:0.335390117139
1 3:0.775875885073
1 4:0.2861324916
1 5:0.388183721399
1 6:0.309104208562
2 3:0.988752754638
2 4:0.194620061128
2 5:0.357792138245
2 6:0.394144063653
3 4:1.0
3 5:0.790732215778
3 6:0.724841722522
4 5:0.375003329671
4 6:0.412549136229
5 6:0.463380477388
</hsp>