sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCJ-01087-01085
X
>2EEW-A34-A32
X
>3CXC-01087-01085
X
>3LA5-A36-A34
X
>1QVG-01087-01085
X
>1VQ7-01087-01085
X
>1YI2-01087-01085
X
>1VQ4-01087-01085
X
>1YIT-01087-01085
X
>1VQ5-01087-01085
X
>1VQ6-01087-01085
X
>1YJN-01087-01085
X
>1K9M-A1087-A1085
X
</seq>
<hsp>
0 1:1.0
0 2:0.203672270822
0 3:0.515485571396
0 4:0.386994325061
0 5:0.291163702676
0 6:0.364241378904
0 7:0.289903321013
0 8:0.361619228283
0 9:0.314146422978
0 10:0.326638852913
0 11:0.347705031072
0 12:0.34985739443
1 2:0.869236699402
1 3:0.607209659923
1 4:0.977467062326
1 5:0.851210322099
1 6:0.84780472176
1 7:0.829407310763
1 8:0.832772199693
1 9:0.93418576089
1 10:0.833292703101
1 11:0.807867069244
1 12:0.831338290683
2 3:0.37950686416
2 4:0.37916332666
2 5:0.164811623516
2 6:0.301361117638
2 7:0.145051181074
2 8:0.281000655436
2 9:0.291155081155
2 10:0.212956608575
2 11:0.268163322302
2 12:0.190808969951
3 4:0.525950790123
3 5:0.379921635375
3 6:0.501425157601
3 7:0.383777198008
3 8:0.464454195033
3 9:0.520848908148
3 10:0.404912647812
3 11:0.45422821145
3 12:0.372384801209
4 5:0.260352422032
4 6:0.275367886186
4 7:0.302645023105
4 8:0.249742330483
4 9:0.192226252782
4 10:0.246023955101
4 11:0.283859849269
4 12:0.312921674844
5 6:0.209017590227
5 7:0.0642703875208
5 8:0.1656224879
5 9:0.182036199301
5 10:0.100476859301
5 11:0.186192837028
5 12:0.113953954987
6 7:0.189357596598
6 8:0.0586445768986
6 9:0.166887507954
6 10:0.151909998341
6 11:0.0791044834401
6 12:0.240770085031
7 8:0.155664800641
7 9:0.203942283853
7 10:0.0971725702538
7 11:0.162958156063
7 12:0.111437148799
8 9:0.142602824303
8 10:0.111015441997
8 11:0.0717397756492
8 12:0.205684737094
9 10:0.164579957812
9 11:0.166641255623
9 12:0.257679880506
10 11:0.116096568517
10 12:0.125165283261
11 12:0.219426310961
</hsp>