sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3I2R-C11-A3
X
>3BBK-C11-A3
X
>2D2K-D11-A3
X
>1X9C-D11-A3
X
>2P7D-D11-A3
X
>1ZFT-D11-A3
X
>3CQS-C11-A3
X
>1M5V-B60-A10
X
>3BBM-C11-A3
X
>2P7E-D11-A3
X
>1M5O-B60-A10
X
</seq>
<hsp>
0 1:0.416059098127
0 2:0.407228183165
0 3:0.414030905298
0 4:0.301510860514
0 5:0.286067815236
0 6:0.283942111428
0 7:0.452369593998
0 8:0.359408849044
0 9:0.27235267804
0 10:0.698699072691
1 2:0.7015915851
1 3:0.716399640093
1 4:0.328809555211
1 5:0.456004116408
1 6:0.487201241317
1 7:0.637593955367
1 8:0.4540130779
1 9:0.42632713947
1 10:0.586838252153
2 3:0.500583953211
2 4:0.609244403967
2 5:0.549482555427
2 6:0.264935863595
2 7:0.569845990645
2 8:0.585020117731
2 9:0.407702237584
2 10:0.894535699282
3 4:0.443284524268
3 5:0.323682000146
3 6:0.469763557749
3 7:0.481133135343
3 8:0.438832295034
3 9:0.383786201579
3 10:1.0
4 5:0.247518281067
4 6:0.42913343808
4 7:0.530834989086
4 8:0.321035726131
4 9:0.293661964463
4 10:0.787527683113
5 6:0.411193115925
5 7:0.347389062413
5 8:0.217140169962
5 9:0.221732419921
5 10:0.765881713766
6 7:0.504409342595
6 8:0.413104070964
6 9:0.253909382127
6 10:0.711844860291
7 8:0.293431485334
7 9:0.339136876323
7 10:0.72660492165
8 9:0.222531991398
8 10:0.660281873771
9 10:0.719705393036
</hsp>