sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3BBK-C7-A5
X
>2HOL-A60-A59
X
>3D2V-A60-A59
X
>1U9S-A14-A13
X
>3R8O-A265-A264
X
>2HOM-A61-A60
X
>3D2V-B60-B59
X
>3F1G-A257-A256
X
>3F1E-A257-A256
X
>2HOJ-A60-A59
X
>2GDI-X63-X62
X
>2GDI-Y63-Y62
X
>1FJG-A257-A256
X
</seq>
<hsp>
0 1:0.857178248499
0 2:0.840053877476
0 3:0.813362252985
0 4:0.567105173605
0 5:0.980455725986
0 6:0.84879421445
0 7:0.68666470927
0 8:0.686635430857
0 9:0.867460819635
0 10:0.999999850566
0 11:0.937619991543
0 12:0.626114083834
1 2:0.313264808608
1 3:0.361143660598
1 4:0.426226666943
1 5:0.377543604882
1 6:0.309130949408
1 7:0.375011871381
1 8:0.374965744849
1 9:0.042883144024
1 10:0.384146434315
1 11:0.360176739059
1 12:0.439320701081
2 3:0.320283610033
2 4:0.324823949017
2 5:0.318882649584
2 6:0.0168715086248
2 7:0.409655748225
2 8:0.409425190086
2 9:0.284713168579
2 10:0.333218704754
2 11:0.285122101219
2 12:0.431834766387
3 4:0.479655307202
3 5:0.232144981253
3 6:0.310094655645
3 7:0.483010440943
3 8:0.483222477674
3 9:0.348047945205
3 10:0.254914482871
3 11:0.173785107633
3 12:0.506908076495
4 5:0.547607649719
4 6:0.331520419601
4 7:0.310278430717
4 8:0.309552711053
4 9:0.42743738831
4 10:0.557992744467
4 11:0.510160639367
4 12:0.31012149325
5 6:0.308599155142
5 7:0.459249047768
5 8:0.459444017083
5 9:0.366485621618
5 10:0.0350269367938
5 11:0.0647894347644
5 12:0.508416949186
6 7:0.412039055212
6 8:0.411804527559
6 9:0.280159288822
6 10:0.322869831129
6 11:0.274146711438
6 12:0.435595693635
7 8:0.00195692034271
7 9:0.398315923271
7 10:0.455652282086
7 11:0.446301530533
7 12:0.0953074867424
8 9:0.398254062315
8 10:0.455828779337
8 11:0.446507284558
8 12:0.0956909279608
9 10:0.375403958756
9 11:0.346462274616
9 12:0.459780001841
10 11:0.0915801837182
10 12:0.507797216893
11 12:0.488746929603
</hsp>