sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1QRT-B14-B13
X
>3R8S-A2029-A2028
X
>3V7E-D100-D99
X
>3V7E-C100-C99
X
>1ZJW-B14-B13
X
>3R8T-A2028-A2027
X
>1QRS-B14-B13
X
</seq>
<hsp>
0 1:0.817071310906
0 2:0.576540072915
0 3:0.51115281112
0 4:0.207199627161
0 5:0.918963145309
0 6:0.158600547424
1 2:0.646429680351
1 3:0.672943589305
1 4:0.90234052857
1 5:0.130017981565
1 6:0.710802056511
2 3:0.122545917701
2 4:0.530288756151
2 5:0.695287330768
2 6:0.496935115299
3 4:0.484453448132
3 5:0.725400020821
3 6:0.439306475745
4 5:0.999999640897
4 6:0.260568333643
5 6:0.814051169013
</hsp>