sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-B11-B10
X
>3OI1-B11-B10
X
>3OHZ-B11-B10
X
>3OH5-B11-B10
X
>3OH7-B11-B10
X
>3OHJ-B11-B10
X
>3OHK-B11-B10
X
>3F1H-B11-B10
X
>3F1F-B11-B10
X
</seq>
<hsp>
0 1:0.713377468855
0 2:0.752794786178
0 3:0.968984739261
0 4:0.924351265784
0 5:0.999991568747
0 6:0.966750063802
0 7:0.696643347214
0 8:0.690621940786
1 2:0.0852249672363
1 3:0.384405693501
1 4:0.339152008298
1 5:0.382999430314
1 6:0.349905240977
1 7:0.594921463495
1 8:0.599756982748
2 3:0.330460708332
2 4:0.294921446447
2 5:0.33341948695
2 6:0.310304705493
2 7:0.594803855175
2 8:0.598499241558
3 4:0.0695390819635
3 5:0.339658445663
3 6:0.34969638799
3 7:0.593442191932
3 8:0.597189480529
4 5:0.332156061491
4 6:0.331132448843
4 7:0.558418602441
4 8:0.562798189679
5 6:0.06085168487
5 7:0.66911361352
5 8:0.670473670364
6 7:0.646541494987
6 8:0.648399841394
7 8:0.0327074384868
</hsp>