sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2FMT-D16-D15
X
>2FMT-C16-C15
X
>1R3E-C12-C11
X
>3EPH-F58-F57
X
>2ZY6-A37-A36
X
>3BT7-D13-D12
X
>1ZL3-B15-B14
X
>1K8W-B15-B14
X
</seq>
<hsp>
0 1:0.151433425598
0 2:0.753346852703
0 3:0.950841657092
0 4:0.668404474493
0 5:0.950000034413
0 6:0.829475178873
0 7:0.830954513576
1 2:0.847698654358
1 3:1.0
1 4:0.71889745427
1 5:0.952967787431
1 6:0.906078920775
1 7:0.919272048058
2 3:0.449187210299
2 4:0.478450058426
2 5:0.86748368137
2 6:0.380259238152
2 7:0.324282722847
3 4:0.637335963727
3 5:0.836779593791
3 6:0.47036361071
3 7:0.464980402628
4 5:0.457065127668
4 6:0.331268760334
4 7:0.381632287719
5 6:0.596942276183
5 7:0.679464728556
6 7:0.0995249830938
</hsp>