sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2ZJR-X898-X897
X
>1N32-A273-A272
X
>3I2U-C13-C12
X
>3F1F-A135-A134
X
>3DIZ-A129-A128
X
>3F1H-A135-A134
X
>2OTL-01039-01038
X
</seq>
<hsp>
0 1:1.0
0 2:0.996301737818
0 3:0.765924808669
0 4:0.981239507527
0 5:0.763716349825
0 6:0.519206979563
1 2:0.0622610882262
1 3:0.473572820557
1 4:0.0468293658406
1 5:0.474537527976
1 6:0.549993381702
2 3:0.452123841115
2 4:0.0867653335973
2 5:0.453311027565
2 6:0.534369926551
3 4:0.478415043588
3 5:0.00711442775922
3 6:0.44938489346
4 5:0.478760598932
4 6:0.527515217423
5 6:0.446628543629
</hsp>