sequences=17
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>301D-B19-A9
X
>3R8T-A2166-A2164
X
>1Y26-X41-X12
X
>3DS7-B39-B10
X
>3GES-A39-A10
X
>1Y27-X40-X11
X
>2EEV-A39-A10
X
>3GOG-A38-A9
X
>1U8D-A39-A10
X
>2EES-A39-A10
X
>3GOT-A39-A10
X
>2G9C-A39-A10
X
>2B57-A38-A9
X
>3FO4-A37-A8
X
>3GER-A39-A10
X
>3GAO-A39-A10
X
>2EEU-A39-A10
X
</seq>
<hsp>
0 1:0.80258856738
0 2:0.351562392093
0 3:0.373510796389
0 4:0.370500380219
0 5:0.287248072567
0 6:0.321307547181
0 7:0.339551276743
0 8:0.314929118455
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0 13:0.333228544335
0 14:0.337643580334
0 15:0.321744246333
0 16:0.318221322233
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1 3:0.992041582052
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1 13:0.965746219459
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1 15:0.9611183055
1 16:0.952792900155
2 3:0.0797248145657
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3 4:0.0746960211903
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3 6:0.07701981619
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8 9:0.0693997438289
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10 11:0.0302097010784
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11 12:0.0615569431379
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13 16:0.0464561601598
14 15:0.0697225910069
14 16:0.0674724517106
15 16:0.02408911314
</hsp>