sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1ZHO-F17-F16
X
>1ZHO-H17-H16
X
>1ZHO-B17-B16
X
>2UXC-A412-A411
X
>2HW8-B16-B15
X
>3CC7-01730-01729
X
>3G6E-01730-01729
X
>3CME-01730-01729
X
>3CCV-01730-01729
X
>1ZHO-D17-D16
X
>3CCU-01730-01729
X
</seq>
<hsp>
0 1:1.0
0 2:0.707985356434
0 3:0.889036941955
0 4:0.656919759257
0 5:0.783484201879
0 6:0.803511215992
0 7:0.810045169457
0 8:0.810147879283
0 9:0.798567829368
0 10:0.812526698592
1 2:0.752638214071
1 3:0.445989098953
1 4:0.492397818994
1 5:0.333299884587
1 6:0.352067398493
1 7:0.315741686831
1 8:0.331979948724
1 9:0.613413208125
1 10:0.352268214281
2 3:0.450877714566
2 4:0.327240893992
2 5:0.473664316795
2 6:0.455549816358
2 7:0.483050336533
2 8:0.474227764363
2 9:0.226050982443
2 10:0.469206267193
3 4:0.314761337885
3 5:0.24531386319
3 6:0.240541918579
3 7:0.240248586239
3 8:0.251059552966
3 9:0.316850180746
3 10:0.288378308287
4 5:0.190111450155
4 6:0.198261219521
4 7:0.213875603541
4 8:0.217657064768
4 9:0.284957354848
4 10:0.213556398746
5 6:0.0666483054098
5 7:0.0361271561429
5 8:0.0666134013036
5 9:0.346231610929
5 10:0.101410698317
6 7:0.0615203786671
6 8:0.0354475963565
6 9:0.311373472938
6 10:0.066381918221
7 8:0.0512406522922
7 9:0.343752707494
7 10:0.0896629441271
8 9:0.322919723084
8 10:0.072836902102
9 10:0.327725104087
</hsp>