sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2ZJR-X940-X2274
X
>3R8T-A463-A683
X
>1VQ9-0870-0874
X
>3OH5-A478-A692
X
>3OH7-A478-A692
X
>3OHK-A478-A692
X
>3OHJ-A478-A692
X
>3OH5-A1733-A1313
X
>3OH7-A1733-A1313
X
>3U5H-5356-5765
X
>1GTS-B17-B54
X
</seq>
<hsp>
0 1:0.392547620211
0 2:0.345329336845
0 3:0.407113587543
0 4:0.42075358678
0 5:0.424854764352
0 6:0.407574224321
0 7:0.420894911062
0 8:0.415172544013
0 9:0.349566887021
0 10:0.999999954288
1 2:0.341910894949
1 3:0.070762179132
1 4:0.0769482729506
1 5:0.0996686541866
1 6:0.10168103834
1 7:0.188586733113
1 8:0.184706755161
1 9:0.159768602509
1 10:0.862424989071
2 3:0.352827223921
2 4:0.366978864818
2 5:0.33657429769
2 6:0.32582484137
2 7:0.479915018993
2 8:0.472692368242
2 9:0.377870752212
2 10:0.973204378322
3 4:0.0243276270473
3 5:0.0495416891082
3 6:0.0517994781344
3 7:0.164378531613
3 8:0.158949628519
3 9:0.127731367394
3 10:0.849697998101
4 5:0.0569549403529
4 6:0.0650289166418
4 7:0.161589254034
4 8:0.156697201649
4 9:0.135253089121
4 10:0.847479507699
5 6:0.0256429878822
5 7:0.201108022875
5 8:0.19531771062
5 9:0.142356221701
5 10:0.864465868863
6 7:0.198724795769
6 8:0.192478843292
6 9:0.130291950517
6 10:0.871396930395
7 8:0.0138879407931
7 9:0.142438266662
7 10:0.834759092904
8 9:0.13595926133
8 10:0.837910606885
9 10:0.914616926315
</hsp>