sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHJ-A225-A399
X
>3KNI-A225-A399
X
>3OHK-A225-A399
X
>3OHZ-A225-A399
X
>3OH5-A225-A399
X
>3OI1-A225-A399
X
>3OH7-A225-A399
X
>2J03-A225-A399
X
>2J01-A225-A399
X
</seq>
<hsp>
0 1:0.975385770679
0 2:0.10589359138
0 3:0.727172774012
0 4:0.424837782772
0 5:0.811829796079
0 6:0.459570165439
0 7:0.56587169189
0 8:0.600705125431
1 2:0.959531728345
1 3:0.981253319531
1 4:0.999996942479
1 5:0.979725868505
1 6:0.961189383651
1 7:0.877192003048
1 8:0.905548378569
2 3:0.702990990335
2 4:0.393985947126
2 5:0.77820799524
2 6:0.407101759817
2 7:0.518612881533
2 8:0.552412593851
3 4:0.453649352631
3 5:0.140693999178
3 6:0.447018033445
3 7:0.450069969085
3 8:0.462243721104
4 5:0.543559806777
4 6:0.127264093198
4 7:0.253747200789
4 8:0.264290733476
5 6:0.513742019985
5 7:0.499370382426
5 8:0.506507197132
6 7:0.205986380949
6 8:0.214178803789
7 8:0.0701630506893
</hsp>