sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2QA4-0305-01272
X
>3CCL-0305-01273
X
>3CCS-0305-01273
X
>3CME-0305-01273
X
>2J02-W20-W7
X
>2J00-W20-W7
X
</seq>
<hsp>
0 1:0.135775613703
0 2:0.119046997647
0 3:0.152311421274
0 4:0.920431909609
0 5:0.999995717492
1 2:0.058941907544
1 3:0.0888824868207
1 4:0.844210971821
1 5:0.95826679658
2 3:0.0758596559416
2 4:0.850676241669
2 5:0.966439492368
3 4:0.804424180363
3 5:0.909106506516
4 5:0.509757585656
</hsp>