ClaRNA

Doublet Group info: classifier/base-phosphate/H_8BPh/CA

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: base-phosphate
Desc: H_8BPh/CA
Sub-clusters:
count: 19     show
H_8BPh/CA/sub-001
H_8BPh/CA/sub-002
H_8BPh/CA/sub-003
H_8BPh/CA/sub-004
H_8BPh/CA/sub-005
H_8BPh/CA/sub-006
H_8BPh/CA/sub-007
H_8BPh/CA/sub-008
H_8BPh/CA/sub-009
H_8BPh/CA/sub-010
H_8BPh/CA/sub-011
H_8BPh/CA/sub-012
H_8BPh/CA/sub-013
H_8BPh/CA/sub-014
H_8BPh/CA/sub-015
H_8BPh/CA/sub-016
H_8BPh/CA/sub-017
H_8BPh/CA/sub-018
H_8BPh/CA/sub-019
Members:
count: 1074
download members
3AKZ:E72:E69
3OHC:A1312:A1214
3OHD:A1312:A1214
3OI0:A1312:A1214
3OHY:A1312:A1214
3AKZ:F72:F69
3OGE:A1312:A1214
3OGY:A1312:A1214
2J02:A1312:A1214
3KNI:A1970:A584
2ZJR:X1920:X505
2QEX:01644:01643
3CCM:01042:01041
3CME:01042:01041
1JJ2:01042:01041
1Q86:A1644:A1643
1N8R:A1644:A1643
1S72:01042:01041
3CCJ:01644:01643
1KD1:A1644:A1643
3CPW:01042:01041
2OTL:01644:01643
1K9M:A1644:A1643
3CCE:01042:01041
3KNI:A992:A991
3CD6:01042:01041
1QVG:01644:01643
1VQ7:01644:01643
1Q82:A1644:A1643
3OI1:A986:A985
2UXC:A335:A334
1VQO:01644:01643
1VQ6:01042:01041
1VQN:01644:01643
1VQL:01644:01643
3CMA:01644:01643
3OH7:A986:A985
1VQ9:01644:01643
1VQM:01644:01643
3R8O:A343:A342
3OHK:A986:A985
3OXD:A65:A64
2J03:A986:A985
3R8N:A343:A342
1FJG:A1427:A1426
3KNI:A2777:A2776
7MSF:R7:R6
1XMQ:A1421:A1420
3OI1:A2702:A2701
2VQF:A1427:A1426
2UXC:A1427:A1426
2J01:A2749:A2748
2J03:A2749:A2748
3R8T:A978:A977
3R8S:A978:A977
3OXE:B53:B52
3R8S:A1529:A1528
1YFG:A59:A58
2ZJR:X898:X897
2DR8:B32:B31
3U5F:6994:6997
3U5B:21464:21506
3U5D:12004:12049
3U5H:52008:52053
3R8S:A1072:A1081
2ZJR:X992:X1001
2QA4:01038:01037
3F1H:A1001:A1000
3OHK:A983:A982
3OH5:A983:A982
3CCQ:01142:01151
3CCR:01142:01151
1VQM:01142:01151
3CME:01142:01151
3CMA:01142:01151
2ZJR:X895:X894
2J03:A983:A982
3CCS:01142:01151
1VQP:01142:01151
2OTL:01142:01151
2J01:A983:A982
1VQK:01142:01151
1K9M:A1039:A1038
3I56:01142:01151
1VQO:01142:01151
3OHZ:A983:A982
1K8A:A1039:A1038
1FFK:01038:01037
3CC2:01039:01038
1YI2:01142:01151
3CCV:01142:01151
1YJW:01142:01151
1YHQ:01039:01038
1VQ5:01039:01038
3CC2:01142:01151
1VQ6:01142:01151
1YJ9:01039:01038
1JJ2:01039:01038
1S72:01039:01038
1VQM:01039:01038
3U5D:11198:11207
3R8O:A1224:A1223
1YJ9:01142:01151
1Q86:A1039:A1038
1Q81:A1039:A1038
2OTL:01039:01038
3F1H:A135:A134
3F1F:A135:A134
1VQ7:01039:01038
1YIJ:01039:01038
3CD6:01039:01038
1VQO:01039:01038
1YIT:01039:01038
3CMA:01039:01038
1VQ4:01039:01038
3CCL:02187:02186
1VQ6:02187:02186
2QA4:02186:02185
1VQ7:02187:02186
1VQP:01039:01038
3CCU:01039:01038
3CCS:02187:02186
1VQ4:02187:02186
1YJN:02187:02186
3CCE:02187:02186
1YI2:02187:02186
3CC7:0232:0231
1Q82:A232:A231
3CCR:01221:01220
3CCS:0232:0231
2OTJ:0232:0231
3CXC:0232:0231
1VQL:01221:01220
3CD6:01221:01220
3OIJ:C9:C8
1QVG:0232:0231
1VQO:01221:01220
1NJI:A232:A231
3CPW:01221:01220
1Q86:A2187:A2186
3G6E:01221:01220
1VQP:01221:01220
1JJ2:0232:0231
3CC4:01221:01220
1M90:A232:A231
3CCM:01221:01220
2QA4:0232:0231
1K8A:A232:A231
1S72:0232:0231
3CC2:01221:01220
3CCV:01221:01220
3CCE:01221:01220
1Q86:A1221:A1220
1YIT:01221:01220
3I56:01221:01220
3OIJ:D9:D8
3CCS:01221:01220
1N8R:A232:A231
3CMA:01221:01220
3U5F:6925:6924
1KD1:A1221:A1220
3KNH:A133:A132
1N8R:A1221:A1220
1VQO:02645:02644
2QA4:01220:01219
1VQL:02645:02644
3OI0:A1202:A1201
3OHY:A1202:A1201
1VQN:02645:02644
3CMA:02645:02644
3CCU:02645:02644
3U5B:2148:2147
2J01:A498:A497
1Q81:A2645:A2644
2ZJR:X1871:X1870
2VQE:A142:A141
3R8T:A1998:A1997
3U5F:6145:6144
2J03:A1836:A1835
2GCS:B85:B84
3R8T:A2192:A2191
1L3D:A9:A8
2QA4:0991:0990
3B4B:B85:B84
2J01:A1836:A1835
3OH5:A1836:A1835
2UUB:A142:A141
2H0Z:B85:B84
2OTL:0992:0991
3KNH:A264:A263
3G6E:0992:0991
2UXC:A273:A272
1Q82:A992:A991
3RW6:F48:F47
3CCL:01774:01773
3I56:01692:01691
1KD1:A1692:A1691
2H0X:B85:B84
3OH5:A1922:A1921
3CCU:01774:01773
2A43:A6:A5
1YIT:0992:0991
2GCV:B85:B84
1Q86:A1692:A1691
1FJG:A142:A141
1VQ5:01774:01773
3OHK:A1922:A1921
1YJ9:01692:01691
1YJN:0992:0991
3CCE:0992:0991
1NJI:A1774:A1773
1XMQ:A142:A141
1YJW:0992:0991
3CC7:02091:02090
2QEX:0992:0991
1M90:A992:A991
2OTL:01774:01773
3CCS:0992:0991
3CCQ:01774:01773
1K9M:A1692:A1691
3R8T:A1912:A1911
1K8A:A1692:A1691
3U5F:6350:6349
3OGY:A273:A272
3CCQ:0992:0991
1VQ7:0992:0991
2VQE:A273:A272
2VQE:A601:A600
3CCV:01774:01773
3I56:0992:0991
1N8R:A992:A991
3F1F:A2194:A2193
2OTJ:01774:01773
1VQL:0992:0991
3G6E:01692:01691
3OHY:A142:A141
1N8R:A1692:A1691
1K8A:A1774:A1773
3F1E:A273:A272
3F1H:A2194:A2193
3G6E:01774:01773
3OHK:A1597:A1596
3CCU:01692:01691
3CCE:01774:01773
3CCQ:01692:01691
3CC2:01774:01773
1VQ7:01774:01773
1S72:01692:01691
1VQN:0992:0991
2J00:A273:A272
3R8O:A621:A620
1YIT:01774:01773
1VQM:0992:0991
3CXC:01692:01691
3OH7:A1597:A1596
3CCJ:0992:0991
1VQ6:01692:01691
2UUA:A273:A272
1N32:A273:A272
1VQK:0992:0991
3CC7:01692:01691
1VQ8:0992:0991
3CCM:01774:01773
3BBM:C13:C12
1VQ6:0992:0991
3CXC:02091:02090
2J02:A1238:A1237
1XMQ:A601:A600
3CCR:0992:0991
1Q81:A992:A991
3CC4:01692:01691
3CR1:C13:C12
1Q82:A1692:A1691
3CCS:01774:01773
1NJI:A1692:A1691
1Q86:A1774:A1773
3I2U:C13:C12
1FG0:A82:A81
1K9M:A992:A991
3OHC:A601:A600
1VQN:01774:01773
1VQ9:0992:0991
1YIT:02091:02090
3OHD:A601:A600
1FJG:A273:A272
1XMQ:A1233:A1232
3I2S:C13:C12
1K9M:A1774:A1773
3I2R:C13:C12
3CD6:02091:02090
3GS5:C30:C29
3R8S:A384:A383
1YJ9:02091:02090
1VQ5:01692:01691
2H0S:B85:B84
1VQO:090:089
3F1F:A505:A504
1VQN:090:089
3OH5:A390:A389
3OH7:A390:A389
3CMA:090:089
2J01:A744:A743
3CMA:0156:0155
3CME:090:089
1VQ9:090:089
3CCJ:02091:02090
3OHZ:A390:A389
1VQ5:0156:0155
2QA4:0156:0155
3CCU:01601:01600
1FJG:A423:A422
3CCM:0156:0155
3OI1:A390:A389
3G71:0156:0155
1M90:A156:A155
1YI2:0156:0155
1Q82:A1601:A1600
1VQK:0156:0155
3R8T:A556:A555
1YJ9:0156:0155
3CPW:0156:0155
437D:A9:A8
1YJW:0156:0155
1N8R:A156:A155
1QA6:C53:C52
1QA6:D53:D52
3CC7:0156:0155
3CC4:0156:0155
3CCU:0156:0155
3CCJ:02534:02533
3I56:0156:0155
1YJN:0156:0155
1S72:01601:01600
3CME:01893:01892
3KNH:A592:A591
1YIT:0156:0155
3CCR:01893:01892
2QEX:01893:01892
2OTJ:01893:01892
3R8S:A556:A555
1L2X:A9:A8
3CCQ:01893:01892
3G71:01893:01892
3CCU:01893:01892
1YJW:01893:01892
3G6E:01893:01892
1Q82:A1893:A1892
1KD1:A1893:A1892
1YI2:01893:01892
3OHJ:A858:A857
1VQO:01893:01892
3CCR:02534:02533
1M90:A1893:A1892
1VQN:01893:01892
3CC2:01893:01892
3OHK:A858:A857
1VQ4:01893:01892
1YIJ:01893:01892
1Q86:A1893:A1892
3CPW:01893:01892
1FFK:02486:02485
1YJ9:01893:01892
1YIT:01893:01892
3CD6:02534:02533
1N8R:A2534:A2533
1VQ8:02534:02533
1YJN:02534:02533
3CCL:02534:02533
1QVG:02534:02533
1Q82:A2534:A2533
3R8O:A151:A150
3CC2:02534:02533
3CCE:02534:02533
3OI1:A858:A857
3CCM:02534:02533
1YJ9:02534:02533
2QEX:02534:02533
3CCV:02534:02533
1K8A:A2534:A2533
3CC7:02534:02533
1S72:02534:02533
1VQ6:02534:02533
3CCU:02534:02533
3G6E:02534:02533
3CPW:02534:02533
1JJ2:02534:02533
1YIT:02534:02533
1Q81:A2534:A2533
1M90:A2534:A2533
1M90:A1644:A1643
3CPW:01644:01643
2QEX:01042:01041
1NJI:A1644:A1643
1VQ5:01644:01643
1JJ2:01644:01643
1Q82:A1042:A1041
3CC7:01644:01643
1YHQ:01644:01643
3G6E:01644:01643
3U5D:11099:11098
3CC2:01042:01041
3CXC:01644:01643
3CC7:01042:01041
1Q86:A1042:A1041
3CCL:01042:01041
1YIT:01644:01643
1YIJ:01042:01041
3CCU:01644:01643
3CCS:01042:01041
1VQ8:01042:01041
1YJW:01644:01643
1VQL:01042:01041
1YIJ:01644:01643
1Q81:A1644:A1643
3CC4:01042:01041
1VQ5:01042:01041
3CXC:01042:01041
2OUE:D13:D12
1NJI:A992:A991
3I2Q:C13:C12
3B5A:C13:C12
3R8S:A1649:A1648
2VQF:A601:A600
3CPW:01692:01691
1VQL:01774:01773
1YIT:01692:01691
3CCQ:02091:02090
1FJG:A1238:A1237
1VQK:01692:01691
1ZFT:D13:D12
3OHY:A273:A272
1VQM:01774:01773
2UUA:A1238:A1237
1VQP:01692:01691
1YHQ:01692:01691
1K8A:A2091:A2090
1ZFV:D13:D12
2QEX:01692:01691
2UUB:A601:A600
3KNI:A498:A497
3DIZ:A129:A128
3G71:02091:02090
3OH5:A1755:A1754
3G6E:02091:02090
1X9C:D13:D12
2D2L:D13:D12
3B5F:C13:C12
3CMA:02091:02090
1YHQ:02091:02090
1NJI:A2091:A2090
1N8R:A2091:A2090
3OH5:A498:A497
3BBI:C13:C12
1VQP:02091:02090
1VQ8:01774:01773
1VQO:01692:01691
3I56:02091:02090
3U5H:51929:51928
1YJW:02091:02090
1ZHO:D28:D27
1HR2:A105:A104
2UUA:A601:A600
3CPW:02091:02090
3D2V:B21:B20
2J01:A1755:A1754
3OI1:A498:A497
3OHZ:A498:A497
1VQM:02091:02090
1VQN:02091:02090
1VQL:02091:02090
3CME:02091:02090
3OHZ:A744:A743
3DIX:A129:A128
3R8N:A486:A485
3OHK:A744:A743
3CCS:090:089
3R8S:A735:A734
3OI1:A428:A427
3CPW:090:089
3DIO:X129:X128
1VQ8:02091:02090
1VQK:02091:02090
3DIY:A129:A128
3D0X:A126:A125
1ZHO:H28:H27
3CCE:090:089
3CCM:090:089
3OHJ:A390:A389
1GID:A105:A104
1VQK:090:089
1VQL:090:089
2J03:A1597:A1596
3OHK:A428:A427
3F1H:A505:A504
1VQP:090:089
3DIG:X129:X128
3R8T:A2650:A2649
3OHK:A390:A389
3OHY:A601:A600
1FFK:0155:0154
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/>> 13165 0.460
stacking/<< 13165 0.464
stacking/<> 654 0.478
base-phosphate/H_9BPh 715 0.488
base-phosphate/H_0BPh 256 2.005
base-ribose/H_0BR 590 2.172
base-ribose/W_6BR 160 2.271
base-ribose/H_9BR 255 2.529
base-ribose/H_8BR 45 2.558
base-ribose/SW_2BR 1047 2.905

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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