sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1E-Z8-Z23
X
>3F1G-Z8-Z23
X
>2VQE-A226-A109
X
>3OHC-A226-A109
X
>3OGY-A226-A109
X
>3OGE-A226-A109
X
>3OHD-A226-A109
X
>1N32-A226-A109
X
>2UXC-A226-A109
X
>2UUB-A226-A109
X
>2VQF-A226-A109
X
>1FJG-A226-A109
X
</seq>
<hsp>
0 1:0.00311339849813
0 2:1.0
0 3:0.988077367587
0 4:0.966114506375
0 5:0.969250360784
0 6:0.984618895621
0 7:0.983850772358
0 8:0.992182561656
0 9:0.994775820264
0 10:0.992411754274
0 11:0.994729560741
1 2:0.999931874792
1 3:0.988034660401
1 4:0.965931188318
1 5:0.969060114761
1 6:0.9845849277
1 7:0.983877220158
1 8:0.992140405061
1 9:0.994728310998
1 10:0.992403702867
1 11:0.994687280275
2 3:0.201483587987
2 4:0.257228153227
2 5:0.256234836701
2 6:0.201961203592
2 7:0.14887195196
2 8:0.078346136481
2 9:0.100691113102
2 10:0.131112240933
2 11:0.145852045279
3 4:0.0993168096663
3 5:0.101237370176
3 6:0.0138846674138
3 7:0.202551218134
3 8:0.160331753894
3 9:0.160417912824
3 10:0.146976124075
3 11:0.137536957863
4 5:0.0193086517971
4 6:0.104003505039
4 7:0.267695450369
4 8:0.227769296222
4 9:0.221298805083
4 10:0.21243000178
4 11:0.204146402581
5 6:0.107649034346
5 7:0.27063164538
5 8:0.231161433118
5 9:0.220588797767
5 10:0.210514774294
5 11:0.205055898822
6 7:0.201143513713
6 8:0.15782243643
6 9:0.160789848137
6 10:0.14881284751
6 11:0.136216057302
7 8:0.109023778614
7 9:0.117365926576
7 10:0.0987717752502
7 11:0.12425285031
8 9:0.0918544795407
8 10:0.112874324501
8 11:0.113624008896
9 10:0.0626718223555
9 11:0.0560597805566
10 11:0.0622509517545
</hsp>