sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCR-02117-02065
X
>1QTQ-B20-B7
X
>3CCJ-02117-02065
X
>1QRS-B20-B7
X
>1QRU-B20-B7
X
>2RE8-B20-B7
X
>1QRT-B20-B7
X
>1GTS-B20-B7
X
</seq>
<hsp>
0 1:0.649835780287
0 2:0.463186674799
0 3:0.999902971911
0 4:0.894181721177
0 5:0.99999049972
0 6:0.969416536338
0 7:0.906378768855
1 2:0.523691188069
1 3:0.511014095235
1 4:0.596346123164
1 5:0.838696260315
1 6:0.497282292527
1 7:0.398021228144
2 3:0.856833576216
2 4:0.877826628411
2 5:0.848039895507
2 6:0.749788309692
2 7:0.643636126434
3 4:0.396210648311
3 5:0.78765023042
3 6:0.307036133919
3 7:0.352147585847
4 5:0.639144541287
4 6:0.433109928873
4 7:0.614098008377
5 6:0.579858138645
5 7:0.778850949113
6 7:0.355786822889
</hsp>