ClaRNA

Doublet Group info: classifier/stacking/<</UC/sub-001

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: <</UC/sub-001
Members:
count: 133
download members
1VQM:0934:0933
3CCE:01728:01727
3CC4:01139:01138
1S72:0300:0299
3R8N:A123:A122
1YIJ:02456:02455
2OTJ:02172:02171
1YIT:0847:0846
2J01:A859:A858
3ND4:A13:A12
1JJ2:02456:02455
3GM7:G13:G12
1VQO:0934:0933
3OHC:A159:A158
3D2G:A62:A61
1YI2:0390:0389
3OHC:A15:A14
1VQ9:01895:01894
3OLB:B9:B8
2PXB:B5:B4
3OHY:A624:A623
3F1H:A924:A923
3I56:01021:01020
2CV2:D64:D63
1QVG:025:024
1VQ7:01021:01020
1K8A:A1223:A1222
1VQ9:02372:02371
3F1F:A1084:A1083
2J01:A305:A304
3CMA:02073:02072
1VQ7:0390:0389
3CCU:01728:01727
1N8R:A2456:A2455
3C44:A5:A4
3CCV:01865:01864
1Q81:A2314:A2313
3CPW:0390:0389
1FFK:01794:01793
1YZD:B13:B12
1K9M:A1895:A1894
3OI1:A2617:A2616
2UUB:A313:A312
1VQK:02073:02072
1L8V:A120:A119
3GER:A60:A59
3CMA:0481:0480
2I91:C3:C2
1S72:0847:0846
3OI1:A1691:A1690
2UXC:A822:A821
3R8O:A1388:A1387
1YJW:0639:0638
2ZJR:X1208:X1207
1Q82:A2456:A2455
1JJ2:02493:02492
3SKZ:A30:A29
3R8S:A1685:A1684
1VQL:0390:0389
1MSY:A3:A2
1VQ8:01848:01847
1VQ8:01223:01222
1YIT:01865:01864
3KNI:A1720:A1719
3CCQ:01848:01847
3CC2:02493:02492
1VQ6:02282:02281
3OGE:A239:A238
2QA4:0918:0917
3U5D:11635:11634
2XD0:I15:I14
1Q82:B98:B97
1VQ6:02493:02492
3CD6:01223:01222
3U5H:52232:52231
1N8R:A639:A638
1M90:A1848:A1847
1M90:A847:A846
1VQP:0847:0846
2QUX:L17:L16
1SDS:E2:E1
1K8A:A847:A846
1VQ6:0481:0480
1FFK:0421:0420
1VQ8:02282:02281
1S72:0422:0421
1FFK:0480:0479
1VQ8:0481:0480
1YHQ:01498:01497
3CC4:0422:0421
3KNH:A481:A480
1K9M:A2053:A2052
1Q82:A2560:A2559
3CCU:996:995
1K8A:A265:A264
1VQ9:02697:02696
3F1E:A1127:A1126
1VQK:02560:02559
1K8A:A2247:A2246
1YI2:02560:02559
3KNK:A1306:A1305
3CCJ:0720:0719
3RKF:D60:D59
1FFY:T11:T10
3G71:02053:02052
2UUB:A624:A623
1YIJ:0300:0299
1VQP:0300:0299
2O3Y:B7:B6
3CC4:02697:02696
1YI2:996:995
1XMQ:A624:A623
1VQK:0413:0412
1NJI:A2697:A2696
1FG0:A163:A162
1DUQ:H2:H1
1HR2:A87:A86
1JJ2:02697:02696
3CCR:0934:0933
2ZI0:D14:D13
3CCL:02620:02619
3CCS:025:024
3U5D:1258:1257
1Q81:A934:A933
1YJW:0433:0432
1Q86:A1139:A1138
3OHJ:A1995:A1994
1JJ2:01476:01475
3AMT:B34:B33
3CCQ:01541:01540
3F1G:A410:A409
2QEX:01295:01294
3U5B:21658:21657
Closest classifer groups: show all      show selected
Group Members RMSD
base-phosphate/W_3BPh 17 0.032
stacking/<> 5 0.100
stacking/>> 94 0.101
base-phosphate/H_9BPh 2 0.120
stacking/<< 50 0.122
base-ribose/H_7BR 1 0.144
base-phosphate/H_0BPh 1 0.151
base-ribose/H_0BR 4 0.158
base-phosphate/W_4BPh 10 0.232
base-ribose/W_6BR 2 0.247

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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