ClaRNA

Doublet Group info: classifier/stacking/<</UC/sub-003

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: <</UC/sub-003
Members:
count: 45
download members
3R8T:A394:A393
1VQ6:0720:0719
1ZEV:B10:B9
1VQ9:0265:0264
1VQK:0720:0719
2PN4:C12:C11
1Q81:A2053:A2052
3OHD:A490:A489
3CC7:0720:0719
3OGE:A1500:A1499
1N32:A1017:A1016
3OHC:A490:A489
3CD6:02092:02091
3U5B:2559:2558
3OHZ:A449:A448
3KNI:A1386:A1385
1VQN:01912:01911
3KNH:A826:A825
3CXC:0265:0264
3OHC:A1291:A1290
2VQE:A427:A426
3CCE:02088:02087
3F1F:A2073:A2072
3CCS:02560:02559
3F1E:A813:A812
1YJW:02560:02559
3CD6:02560:02559
1Q86:A265:A264
3OH5:A2352:A2351
1VQ7:02697:02696
3CCJ:0265:0264
2QA4:01475:01474
1M5V:A7:A6
3CCJ:01541:01540
3OHK:A2352:A2351
3OHZ:A1530:A1529
3OIN:C4:C3
1VC7:B21:B20
3LA5:A62:A61
1YIT:02265:02264
3AKZ:G60:G59
2OTL:02265:02264
1YIJ:02697:02696
2UUA:A630:A629
3F1E:A822:A821
Closest classifer groups: show all      show selected
Group Members RMSD
base-phosphate/H_7BPh 2 0.094
base-phosphate/W_3BPh 4 0.128
stacking/<> 5 0.155
stacking/<< 22 0.166
stacking/>> 3 0.194
base-ribose/H_0BR 2 0.220
base-phosphate/W_4BPh 4 0.231
base-ribose/H_9BR 1 0.253
base-ribose/H_7BR 65 0.272
base-phosphate/H_8BPh 2 0.280

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol